| Data | Título | Autor(es) | Tipo | Acesso |
| 2008 | Design and application of genome-scale reconstructed metabolic models | Rocha, I.; Förster, Jochen; Nielsen, Jens | Capítulo de livro | Acesso restrito UMinho |
| Dez-2005 | Evolutionary programming as a platform for in silico metabolic engineering | Patil, Kiran Raosaheb; Rocha, I.; Förster, Jochen, et al. | Artigo | Acesso aberto |
| Jan-2002 | Fermentation performance and intracellular metabolite patterns in laboratory and industrial xylose-fermenting Saccharomyces cerevisiae | Zaldivar, J.; Borges, A.; Johansson, Björn, et al. | Artigo | Acesso aberto |
| 2018 | Guidelines and recommendations on yeast cell death nomenclature | Carmona-Gutierrez, Didac; Bauer, Maria Anna; Zimmermann, Andreas, et al. | Artigo | Acesso aberto |
| 1-Out-2006 | An improved evolutionary algorithm-based framework for identifying in silico metabolic engineering targets | Rocha, I.; Rocha, Miguel; Ferreira, Eugénio C., et al. | Resumo em ata de conferência | Acesso aberto |
| Dez-2016 | Improving the flux distributions simulated with genome-scale metabolic models of Saccharomyces cerevisiae | Pereira, R.; Nielsen, Jens; Rocha, Isabel | Artigo | Acesso aberto |
| 2014 | Improving the internal flux distributions from genome scale metabolic models of S. cerevisiae | Pereira, R. M.; Nielsen, Jens; Rocha, I. | Resumo em ata de conferência | Acesso aberto |
| Mar-2020 | MEMOTE for standardized genome-scale metabolic model testing | Lieven, Christian; Beber, Moritz E.; Olivier, Brett G., et al. | Carta ao editor | Acesso aberto |
| Abr-2018 | Metabolite secretion in microorganisms: the theory of metabolic overflow put to the test | Pinu, Farhana R.; Granucci, Ninna; Daniell, James, et al. | Artigo | Acesso aberto |
| 2008 | Natural computation meta-heuristics for the in silico optimization of microbial strains | Rocha, Miguel; Maia, Paulo; Mendes, Rui, et al. | Artigo | Acesso aberto |
| 27-Jun-2009 | OptFlux: a software for metabolic engineering | Rocha, I.; Maia, Paulo; Pinto, José P., et al. | Resumo em ata de conferência | Acesso aberto |
| 13-Jun-2010 | Optflux: an open-source software platform for in silico metabolic engineering | Rocha, I.; Maia, Paulo; Evangelista, P., et al. | Resumo em ata de conferência | Acesso aberto |
| Abr-2010 | OptFlux: an open-source software platform for in silico metabolic engineering | Rocha, I.; Maia, Paulo; Evangelista, Pedro, et al. | Artigo | Acesso aberto |
| Jun-2015 | Production of β‑ionone by combined expression of carotenogenic and plant CCD1 genes in Saccharomyces cerevisiae | López, Javiera; Essus, Karen; Kim, Il-kwon, et al. | Artigo | Acesso aberto |
| 19-Mar-2020 | Publisher Correction: MEMOTE for standardized genome-scale metabolic model testing | Lieven, Christian; Beber, Moritz E.; Olivier, Brett G., et al. | Corrigenda | Acesso aberto |
| 8-Jun-2015 | TDPS - Turnover dependent phenotypic simulation: a quantitative constraint-based simulation method that accommodates all main strain design strategies | Pereira, R. M.; Vilaça, Paulo; Nielsen, Jens, et al. | Resumo em ata de conferência | Acesso aberto |
| 29-Mar-2019 | Turnover dependent phenotypic simulation: a quantitative constraint-based simulation method that accommodates all main strain design strategies | Pereira, Rui Miguel Pinheiro Silva; Vilaça, P.; Maia, Paulo, et al. | Artigo | Acesso aberto |
