| Data | Título | Autor(es) | Tipo | Acesso |
| Dez-2013 | Algorithms to infer metabolic flux ratios from fluxomics data | Carreira, Rafael; Rocha, Miguel; Villas-Bôas, S. G., et al. | Artigo em ata de conferência | Acesso aberto |
| 2021 | Biochemical complex data generation and integration in genome-scale metabolic models | Ribeiro, João Manuel Capela Araújo | Dissertação de mestrado | Acesso aberto |
| Mar-2024 | BioISO: an objective-oriented application for assisting the curation of genome-scale metabolic models | Cruz, Fernando João Pereira; Capela, João; Ferreira, Eugénio C., et al. | Artigo | Acesso aberto |
| 20-Jun-2019 | Comparison of pathway analysis and constraint-based methods for cell factory design | Vieira, Vítor; Maia, Paulo; Rocha, Miguel, et al. | Artigo | Acesso aberto |
| Jun-2016 | A computation tool for the estimation of biomass composition from genomic and transcriptomic information | Santos, Sophia Torres; Rocha, Isabel | Artigo em ata de conferência | Acesso restrito UMinho |
| 14-Dez-2018 | Development of bioinformatics tools for the classification of transporter systems | Lagoa, Davide Rafael Santos | Dissertação de mestrado | Acesso aberto |
| 6-Dez-2018 | Development of bioinformatics tools to accelerate the reconstruction of genome-scale models | Morais, José Amaro Ferreira | Dissertação de mestrado | Acesso aberto |
| 2013 | Development of computational methods for the determination of biomass composition and evaluation of its impact in genome-scale models predictions | Santos, Sophia Torres | Dissertação de mestrado | Acesso aberto |
| 2017 | Genome-Scale Metabolic Network Reconstruction of the dairy bacterium Streptococcus thermophilus | Cruz, Fernando João Pereira da | Dissertação de mestrado | Acesso aberto |
| 2017 | Genome-wide semi-automated annotation of transporter systems | Dias, Oscar; Gomes, Daniel G.; Vilaça, P., et al. | Artigo | Acesso aberto |
| 12-Ago-2019 | Inferring optimal minimal medium on genome-scale metabolic models using evolutionary algorithms | Santos, Sophia Torres; Correia, Sara; Rocha, Isabel | Comunicação oral | Acesso aberto |
| Ago-2020 | Metabolic engineering strategies for butanol production in Escherichia coli | Ferreira, Ana Sofia Araújo; Pereira, Rui; Wahl, S. Aljoscha, et al. | Artigo | Acesso aberto |
| 2019 | Metabolite integration pipeline for the improvement of human metabolic models | Vieira, Vítor; Ferreira, Jorge; Rodrigues, Rúben André Costa, et al. | Artigo em ata de conferência | Acesso restrito UMinho |
| 8-Dez-2016 | MIYeastK: The Metabolic Integrated Yeast Knowledgebase | Santos, Sophia; Liu, F.; Costa, Christopher, et al. | Resumo em ata de conferência | Acesso aberto |
| 2019 | A model integration pipeline for the improvement of human genome-scale metabolic reconstructions | Vieira, Vítor; Ferreira, Jorge; Rodrigues, Rúben André Costa, et al. | Artigo | Acesso aberto |
| 2019 | Modelling interspecies interactions of syntrophic communities of Syntrophobacter fumaroxidans and Methanospirillum hungatei | Bastos, José Jorge Sampaio | Dissertação de mestrado | Acesso aberto |
| 7-Jan-2018 | Reconstructing high-quality large-scale metabolic models with merlin | Dias, Oscar; Rocha, Miguel; Ferreira, Eugénio C., et al. | Capítulo de livro | Acesso restrito UMinho |
| 17-Set-2020 | A review of methods for the reconstruction and analysis of integrated genome-scale models of metabolism and regulation | Cruz, Fernando; Faria, José Pedro; Rocha, Miguel, et al. | Artigo | Acesso aberto |
| 2022 | Towards a multivariate analysis of genome-scale metabolic models derived from the BiGG models database | Oliveira, Alexandre Rafael Machado; Cunha, Emanuel Rodrigues; Cruz, Fernando João Pereira da, et al. | Artigo em ata de conferência | Acesso aberto |
| 2020 | Troppo - A Python framework for the reconstruction of context-specific metabolic models | Ferreira, Jorge M. L.; Vieira, Vítor; Gomes, Jorge, et al. | Artigo em ata de conferência | Acesso aberto |
