Processing time reduction: an application in living human high-resolution diffusion magnetic resonance imaging data

dc.contributor.authorLori, Nicolas Franciscopor
dc.contributor.authorIbañez, Augustinpor
dc.contributor.authorLavrador, Ruipor
dc.contributor.authorFonseca, Luciapor
dc.contributor.authorSantos, Carlospor
dc.contributor.authorTravasso, Ruipor
dc.contributor.authorPereira, Arturpor
dc.contributor.authorRossetti, Rosaldopor
dc.contributor.authorSousa, Nunopor
dc.contributor.authorAlves, Victorpor
dc.date.accessioned2018-03-19T16:01:24Z
dc.date.issued2016-11
dc.date.updated2018-03-05T14:25:20Z
dc.descriptionUm errata deste artigo encontra-se disponível em: http://hdl.handle.net/1822/52993
dc.description.abstractHigh Angular Resolution Diffusion Imaging (HARDI) is a type of brain imaging that collects a very large amount of data, and if many subjects are considered then it amounts to a big data framework (e.g., the human connectome project has 20 Terabytes of data). HARDI is also becoming increasingly relevant for clinical settings (e.g., detecting early cerebral ischemic changes in acute stroke, and in pre-clinical assessment of white matter-WM anatomy using tractography). Thus, this method is becoming a routine assessment in clinical settings. In such settings, the computation time is critical, and finding forms of reducing the processing time in high computation processes such as Diffusion Spectrum Imaging (DSI), a form of HARDI data, is very relevant to increase data-processing speed. Here we analyze a method for reducing the computation time of the dMRI-based axonal orientation distribution function h by using Monte Carlo sampling-based methods for voxel selection. Results evidenced a robust reduction in required data sampling of about 50 % without losing signal’s quality. Moreover, we show that the convergence to the correct value in this type of Monte Carlo HARDI/DSI data-processing has a linear improvement in data-processing speed of the ODF determination. Although further improvements are needed, our results represent a promissory step for future processing time reduction in big data.por
dc.description.publicationversioninfo:eu-repo/semantics/publishedVersionpor
dc.description.sponsorshipWe thank the financial support by QREN, FEDER, COMPETE, Investigador FCT, FCT Ciencia 2007, FCT PTDC/SAU-BEB/100147/2008, FCT Project Scope UID/CEC/00319/2013, and the ERASMUS projects (FCT stands for "Fundacao para a Ciencia e Tecnologia"). We are thankful the relevant scientific conversations with Alard Roebroeck, Rainer Goebel, Van Wedeen, and Gina Caetano. Data collection for this work was in part from "Human Connectome Project" (HCP; Principal Investigators: Bruce Rosen, M.D., Ph.D., Arthur W. Toga, Ph.D., Van J. Weeden, MD). HCP funding was provided by the National Institute of Dental and Craniofacial Research (NIDCR), the National Institute of Mental Health (NIMH), and the National Institute of Neurological Disorders and Stroke (NINDS). HCP data are disseminated by the Laboratory of Neuro Imaging at the University of Southern California.por
dc.distributioninternationalpor
dc.identifier.doi10.1007/s10916-016-0594-2por
dc.identifier.eissn1573-689X
dc.identifier.issn0148-5598
dc.identifier.pmid27686222por
dc.identifier.urihttps://hdl.handle.net/1822/52841
dc.language.isoengpor
dc.peerreviewedyespor
dc.publisherSpringerpor
dc.relationinfo:eu-repo/grantAgreement/FCT/5876-PPCDTI/100147/PTpor
dc.relationinfo:eu-repo/grantAgreement/FCT/5876/147280/PTpor
dc.relation.hasversionhttp://hdl.handle.net/1822/52993
dc.relation.publisherversionhttps://link.springer.com/journal/10916por
dc.rightsrestrictedAccesspor
dc.subjectAxonal ODFpor
dc.subjectDiffusion MRIpor
dc.subjectMonte Carlo sampling methodspor
dc.subjectOptimizationpor
dc.subjectWhite matterpor
dc.subject.wosScience & Technology
dc.titleProcessing time reduction: an application in living human high-resolution diffusion magnetic resonance imaging datapor
dc.typearticlepor
dspace.entity.typePublicationen
oaire.citationIssue11por
oaire.citationVolume40por
sdum.export.identifier4234
sdum.journalJournal of Medical Systemspor

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