From PDFs to places: A semi-automated, auditable workflow to map study localities for geoheritage inventories

dc.contributor.authorFaria J.P.
dc.contributor.authorCastro, Cecilia
dc.contributor.authorBrilha, J. B.
dc.contributor.authorLeiva, V.
dc.date.accessioned2026-10-02T16:27:36Z
dc.date.embargo2027-09-17
dc.date.issued2026-09-17
dc.description.abstractThe scientific relevance of geological sites can be reflected in the intensity and diversity of research conducted there and in the publications that document those places. For geoconservation, however, this literature signal is useful only when the underlying localities can be identified, mapped, and checked against source evidence. Locality evidence relevant to geoconservation is often dispersed across heterogeneous portable document format (PDF) articles and is rarely available as geocoded, source-linked data. We present a semi-automated workflow that converts geoscience PDFs into a map-ready layer of candidate terrestrial study localities for expert review. The workflow uses a large language model (LLM) to extract candidate localities, assigns an article-specific salience score, filters marginal mentions, resolves retained place names to coordinates, and preserves links to supporting passages. We evaluated the workflow on a manually curated benchmark of 99 articles and 241 terrestrial article-locality records. The archived reference workflow output recovered 135 reference localities, produced 216 additional candidates not accepted as reference localities, and missed 106 reference localities, giving precision 0.385, recall 0.560, and š‘­š‘­1 = 0.456. A baseline without LLMs achieved precision 0.082, recall 0.174, and š‘­š‘­1 = 0.112. A repeated-run check under a fixed stability-check configuration on a stratified subset of 20 articles showed measurable variability, with mean š‘­š‘­1 = 0.359 and standard deviation 0.042. The method is intended as an auditable screening tool for finding, inspecting, and prioritising literature-derived locality evidence before formal geoheritage assessment.eng
dc.description.sponsorshipCecilia Castro gratefully acknowledges partial financial support from Portuguese national funds through FCT – Fundação para a CiĆŖncia e a Tecnologia, I.P., within project UID/00013/2025 (https://doi.org/10.54499/UID/00013/2025). JosĆ© Brilha acknowledges financial support provided to the Institute of Earth Sciences (ICT) through the multi-annual funding contract with FCT – Fundação para a CiĆŖncia e a Tecnologia, I.P., under project UID/04683/2025 (https://doi.org/10.54499/UID/04683/2025).
dc.distributioninternational
dc.identifier.articlenumber222
dc.identifier.citationFaria, J.P., Castro, C., Brilha, J. et al. From PDFs to Places: A Semi-Automated, Auditable Workflow to Map Study Localities for Geoheritage Inventories. Geoheritage 18, 222 (2026). https://doi.org/10.1007/s12371-026-01450-z
dc.identifier.doi10.1007/s12371-026-01450-z
dc.identifier.urihttps://hdl.handle.net/1822/103908
dc.language.isoeng
dc.peerreviewedyes
dc.publisherSpringer Nature
dc.relationCenter of Mathematics of the University of Minho [UID/00013/2025]
dc.relationInstitute of Earth Sciences [UID/04683/2025]
dc.relation.hasversionhttps://link.springer.com/article/10.1007/s12371-026-01450-z
dc.rightsembargoedAccess (1 Year)
dc.rights.urihttp://creativecommons.org/licenses/by/4.0/
dc.subjectEvidence mapping
dc.subjectGeoconservation
dc.subjectHuman-in-the-loop validation
dc.subjectInformation extraction
dc.subjectNatural language processing
dc.subject.fosCiĆŖncias Naturais::CiĆŖncias da Terra e do Ambiente
dc.subject.fosCiências Naturais::MatemÔticas
dc.subject.odsEducação de qualidade
dc.titleFrom PDFs to places: A semi-automated, auditable workflow to map study localities for geoheritage inventorieseng
dc.typearticlepor
dspace.entity.typePublication
oaire.awardNumberUID/00013/2025
oaire.awardNumberUID/04683/2025
oaire.awardTitleCenter of Mathematics of the University of Minho [UID/00013/2025]
oaire.awardTitleInstitute of Earth Sciences [UID/04683/2025]
oaire.awardURIhttps://hdl.handle.net/1822/98696
oaire.awardURIhttps://hdl.handle.net/1822/100317
oaire.citation.volume18
oaire.funderIdentifierhttp://doi.org/10.13039/501100001871
oaire.funderIdentifierhttp://doi.org/10.13039/501100001871
oaire.funderNameFundação para a Ciência e a Tecnologia, I.P.
oaire.funderNameFundação para a Ciência e a Tecnologia, I.P.
oaire.fundingStreamAvaliação UID 2023/2024
oaire.fundingStreamAvaliação UID 2023/2024
oaire.versionhttp://purl.org/coar/version/c_970fb48d4fbd8a85
relation.isProjectOfPublication83e6638e-0b9e-4d3c-9003-8643f0f3ddee
relation.isProjectOfPublicationfb86c473-0a4c-43d0-9676-7d2a954869f0
relation.isProjectOfPublication.latestForDiscovery83e6638e-0b9e-4d3c-9003-8643f0f3ddee
sdum.journalGeoheritage

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